Estimating the age of the common ancestor of a sample of DNA sequences.

نویسندگان

  • Y X Fu
  • W H Li
چکیده

We present a simple Monte Carlo method for estimating the age of the most recent common ancestor (MRCA) of a sample of DNA sequences. We show that Templeton's (1993) estimator of the age of the MRCA based on the maximum number of nucleotide differences between two sequences in a sample is inaccurate, and we demonstrate the new method by reanalyzing a sample of DNA sequences from human Y chromosomes and a sample of human Alu sequences.

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

The Genealogy of Branching Processes and the Age of Our Most Recent Common Ancestor

We obtain a weak approximation for the reduced family tree in a near-critical Markov branching process when the time interval considered is long; we also extend Yaglom's theorem and the exponential law to this case. These results are then applied to the problem of estimating the age of our most recent common female ancestor, using mitochondria1 DNA sequences taken from a sample of contemporary ...

متن کامل

Estimating the age of the common ancestor of a DNA sample using the number of segregating sites.

The number of segregating sites in a sample of DNA sequences and the age of the most recent common ancestor (MRCA) of the sequences in the sample are positively correlated. The value of the former can be used to estimate the value of the latter. Using the coalescent approach, we derive in this paper the joint probability distribution of the number of segregating sites and the age of the MRCA of...

متن کامل

Phylogenetic Analysis of Three Long Non-coding RNA Genes: AK082072, AK043754 and AK082467

Now, it is clear that protein is just one of the most functional products produced by the eukaryotic genome. Indeed, a major part of the human genome is transcribed to non-coding sequences than to the coding sequence of the protein. In this study, we selected three long non-coding RNAs namely AK082072, AK043754 and AK082467 which show brain expression and local region conservation among vertebr...

متن کامل

Study on Phylogenetic Relationship among some of Iranian Wild Almond Species using Sequences of ITS1-5.8S rDNA-ITS2 Region and Chloroplastic trnL

Phylogenetic relations among 12 wild species of almonds, one cultivated almond and one species of peach were investigated by using of ITS1-5.8S rDNA-ITS2 sequences and trnL region of chloroplast DNA. To do this, maximum-parsimony and neighbor joining analysis adopted. Results of ITS data showed that studied species of Prunus only divided in two groups but incapable to separate different section...

متن کامل

Characterization of Four Famous Red Grapevine Cultivars

The grape berries due to containing organic acids, sugars, aromatic compounds, phenolic compounds (including anthocyanins, flavanols, flavonols, stilbenes (resveratrol)), tannins, and oil in the pulp, skin, and seed have numerous health benefits for human health. In this study, we investigated genetic and phytochemical characteristics of four famous grapevine cultivars (Shiraz, Sirch, Panje Aro...

متن کامل

ذخیره در منابع من

ذخیره در منابع من قبلا به منابع من ذحیره شده

{@ msg_add @}


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

عنوان ژورنال:
  • Molecular biology and evolution

دوره 14 2  شماره 

صفحات  -

تاریخ انتشار 1997